Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNHDLESIKQAALIEYEVREQGSSDVLDSNISKEPLEFIIGANQIIVGLEKAVLKAQIGEWEEIVIAPEEAYGVYESGYLQEVPRDQF-EGIELEKGMSVFGQTEDNQTIQATIKDFSNTHVMVDYNHPLAGKTLAFRFKVLGFREVSEEEILASHHDSGTGCCGGHGGHGGKKGGGCGCSCSHG
3LUO Chain:A ((10-144))
-------TIRYTLQVEGEVLDQGE------------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFP------PGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREATPEELLHGHAHPS-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58349 for 778 contacts (-75.0/contact) +
2D Compatibility (PS) -13363 + (NN) 1395 + (LL) -56
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -79373.0 ( -102.02 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_3LUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LUO-query.scw
PDB file :
Tito_Scwrl_3LUO.pdb
: