Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKERKKVVKKTKSPALVECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSKFEVISYIPGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVNKRTVSRSKYGTKKAKATDKKATDNKKK
4GKJ Chain:L ((1-122))
-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA----------
General information:
TITO was launched using:
RESULT:
Template:
4GKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22389 for 807 contacts (-27.7/contact) +
2D Compatibility (PS) -12689 + (NN) 370 + (LL) 560
1D Compatibility (HY) -9600 + (ID) 4700
Total energy: -48448.0 ( -60.03 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_4GKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GKJ-query.scw
PDB file :
Tito_Scwrl_4GKJ.pdb
: