Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKRLSDWEYQWAVALVYTICISINARIFYDIDGSASDSIFDPKNSYYMWLVGLIAALLSNLLFDPRGRDCYK----SFQVRYPRFLKAIFKARFFGAFYNAVLGSRLRDFYVMLLTMPFIAAIHEISAYCGHPSNFLVEGLVMLGLVCVFGICSRLCAKLGW |
2L5O Chain:A ((108-143)) | ---------------------------------------------------------------VLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDAEGHHHHHH----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11663 for 153 contacts (-76.2/contact) +
2D Compatibility (PS) -3423 + (NN) -1149 + (LL) 10064
1D Compatibility (HY) 0 + (ID) 100
Total energy: -6271.0 ( -40.99 by residue)
QMean score : 0.341
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