Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKISPSPRKLSKVSTSVSFLISFALYAIGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKEEPKKEEAKEEAKEKSVPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTDILNHAALEAIKSAAHLFPKPDE-T-----VHLKIPIAYSLKED |
1LR0 Chain:A ((23-120)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSEVTGSLDDLIVNLVSQQWRRPPSA---RNGMSVEVLIEMLPDGTITNASVSRSSGDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRIIFKPEDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45351 for 641 contacts (-70.8/contact) +
2D Compatibility (PS) -9745 + (NN) -4474 + (LL) 8604
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -53366.0 ( -83.25 by residue)
QMean score : 0.506
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