Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYKRFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTQLENSSGDTPIKADLALDKFLEETFLSLENVKSVFSEEKETPVTKE---NGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKD-----------YKAQNLVASLYVVFGHKIELVVAL-EEVYRYAFYQNKFHFI---ETIVLENKGKIIA-SGGNQKDFSLGLKKALE--GFFAEN---YRLRYSGSMVADVHHVLVKKGGMFSY------PQKKLRKLFEVFPLALMVEKAKGEAFYFDKGVKKRLLDQSVESYHEKSECYLASPHEA----QILEKHLKGE |
| 4GX3 Chain:A ((64-334)) | --------------------------------------------NVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLV-YGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTG----KEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127469 for 1872 contacts (-68.1/contact) +
2D Compatibility (PS) -25783 + (NN) -10467 + (LL) 3664
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -181505.0 ( -96.96 by residue)
QMean score : 0.344
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