Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNKNIDPCFNPEQFLETQKYKGVVTALIFLLLFFIFLMVAFKKAFFAQANMPTLVMIKQDTATRGTIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKESLKDALNTKGYTILAYNLTPNMAANIRDLNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYPYQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQNNLLEAQQNGIRSGKRDVSFNFIQNHSYTEVERLDGYEVYLSVPLKLQREIETLLDKTKDKLRAKEILVGIINPKSGEILSLASSNRFD----PNAIKTSDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNH---GYYQLGKYTIKD------DFIPSKKAVVEDVLIQSSNVGMIKISKSLNPEDFYNGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNA-------TFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGDIY-IPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSAESYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSIAIQNALEKNRLK |
| 4JBF Chain:A ((80-475)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQY--------GTAGIESSMNETLT--------DWRSALYSMAGINT-------TGSSVVLTINSQMQAVAEAALQGYSGSIV-------VMDPSTGAVLAKASSPSYTHAELGT-------SQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGGGTIHNYANEDMGTIPLREA-----FARSSNTALAQLGVALGADNLVSYARAFGYGTALGQDFSTTPSLMPNPAEMTTWELAWASCGLPVGEHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPE-AVVSTTSPKSLGQAVSADTAAQVREAMLGVVESGTGMGARVPGVKIAGKTGTADV--NG-----NFNSFFIGFAPYDHPTLVVSVVIEGNG-NVLGYGAQVGGRVLAQCLNIQAL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63246 for 3212 contacts (-19.7/contact) +
2D Compatibility (PS) -37828 + (NN) -12087 + (LL) 18052
1D Compatibility (HY) -14000 + (ID) 4950
Total energy: -114059.0 ( -35.51 by residue)
QMean score : 0.405
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