Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKDMQIDA--VYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIAD-NPNGNILVVSHGMSL-TLLLYLLQGGTIEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK
1C81 Chain:A ((1-168))
----MRSIYLCRHGESELNLRGRIG--GDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQTAE-ALG---VPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFA--LRDQDKYRYRYPKGESYEDLVQRL----EPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCP-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1C81.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22673 for 1215 contacts (-18.7/contact) +
2D Compatibility (PS) -17741 + (NN) -6517 + (LL) 3240
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -60241.0 ( -49.58 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_1C81.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C81-query.scw
PDB file :
Tito_Scwrl_1C81.pdb
: