Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYKLIAIDIDGTLLT-DDHKVTDEVKEAIRQAKLKGVKVVLCTGRPLVGVENYLTELELREEGDYVISFNGAFVQDTFTKEVISHLTLGIEDLKDIYEVSLNSNLHMHFFDDK--ALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAPELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIGDQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK |
| 2RAV Chain:A ((1-258)) | MTKALFFDIAGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSELQDRNLIDGYITMNGAYC--FVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKK--IFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEV-LPSIPTC-----EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140779 for 2297 contacts (-61.3/contact) +
2D Compatibility (PS) -27760 + (NN) -11958 + (LL) 956
1D Compatibility (HY) -16000 + (ID) 3900
Total energy: -199441.0 ( -86.83 by residue)
QMean score : 0.471
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