Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLTRKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFVVGTTIGIQGVIMPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGLIGATAMAG---------LVGAGGLGT-IAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLKKD |
| 4K28 Chain:A ((64-142)) | ---------------------------------------------------------------------------------------------------CVVTVPY-----KQALANRVDGLSERAAALGSIN-------VIRRERDGRLLGDNVDGAGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAY---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35607 for 438 contacts (-81.3/contact) +
2D Compatibility (PS) -7393 + (NN) -775 + (LL) 14104
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -35071.0 ( -80.07 by residue)
QMean score : 0.265
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