Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHS-GETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
2KGY Chain:A ((32-95)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEVTGPDADRARAAAVQAV---PGGTAGEVETETG-------EG--AAAYGVLVTRPDGTRVEVHLDR-DFRVLDTE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5738 for 451 contacts (-12.7/contact) +
2D Compatibility (PS) -7029 + (NN) -3380 + (LL) 13924
1D Compatibility (HY) 2400 + (ID) 500
Total energy: -323.0 ( -0.72 by residue)
QMean score : 0.352
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