Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDKLMGKAAIVTESSYGI-----ERFLDEDEQIIQIFKFIRDEVIITSKGIFNIDAQGITGKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTSFSAPISLKVHKNDTEMGFALYKMIKGML
2DTE Chain:A ((3-38))
-FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDL--------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6273 for 149 contacts (-42.1/contact) +
2D Compatibility (PS) -3262 + (NN) -707 + (LL) 6824
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -8168.0 ( -54.82 by residue)
QMean score : 0.148
(partial model without unconserved sides chains):
PDB file :
Tito_2DTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DTE-query.scw
PDB file :
Tito_Scwrl_2DTE.pdb
: