Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTEVSMSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVTDAFQIYIEMAFVIGLVLVFPVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLFGVVFSYLITFPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLSFGVLFELPMVIMLLTRLSLITPNGMRHSRKYAYFCLLIIAAFIAPPEILSHLMITIPLIGLYEISIVVSGLTVRRMDKEMNNV |
1NKZ Chain:B ((2-31)) | ---------------------------------------------------------------------------------------------TLTAEQSEELHKYVIDGTRVFLGLALVAHF------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7616 for 116 contacts (-65.7/contact) +
2D Compatibility (PS) -3108 + (NN) -72 + (LL) 22232
1D Compatibility (HY) -400 + (ID) 250
Total energy: 10786.0 ( 92.98 by residue)
QMean score : 0.301
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