Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKGVAQTTLKP--IGSVRIDGE----VYEARLKT-GYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
2K14 Chain:A ((13-83))
-------------------------------LAYREDDLRGRLGKVITAVPVDGFGEVVIEGIGGTISKSAVSFDNQQISYGTTVLVVDINNGVLSVTPHEP----
General information:
TITO was launched using:
RESULT:
Template:
2K14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20007 for 439 contacts (-45.6/contact) +
2D Compatibility (PS) -6899 + (NN) -156 + (LL) 2044
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -27718.0 ( -63.14 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_2K14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K14-query.scw
PDB file :
Tito_Scwrl_2K14.pdb
: