Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVRKEQGFNVLQINILPQ-----------WDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQGFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQFEPI-YIISGDTDFPTETVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNSEH---QSMAYTLAEHFS-QLEPI--KPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGAT--DYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 4N0R Chain:A ((106-404)) | --------------DGTRYYPMGTTAYAWTHMKETTQEATLKSFGEAGFNKVRMCVFPKNYSLVKDEPALYPFEIEKTIKDKEGNERKEWDFDRFDPAFFQHLEKRIDQLNRLGIEADLILFH-PYDKGRWGFDAMSNEVNVR-----YIKYITARLASFRNVWWSMANEWDYVKAKTVDDWKLLTKTVVENDPYR----HLC----------SIHGATATYFDYWMPEFTHVSIQDEAPVLSSTASATLRKIYRKPVICDEVGYE--GNLPYRWGRLSPQQMTCF----ILNGLLGGI-YVTHG--ECYQQGN-----------EPIFWAQGGSLKGESWKRVKFLRTIIEA---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87770 for 2204 contacts (-39.8/contact) +
2D Compatibility (PS) -29361 + (NN) -10719 + (LL) 11068
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -131332.0 ( -59.59 by residue)
QMean score : 0.360
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