Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDMTNWLQKRVRLSPKETALVF--EGKEETFEEISEAVERLAGKLFALGIRKDEMIALLGKNDRMTFLLIHALQQLGAVTLFLNNRLTKKEIAYQLANAEVKQVIVA-----DTFEDKVGAGI-------------SYSELAETDYKEPELLETWDLSRTASIMYTSGTTGKPKGVI--QTYENHWWSAVASVLNLGLTEKDSWLCAVPIFHISGLSIMMRSVIY--GIPVYLEEHFDEEKITQLLESGKVSTISVVTSMLERLLKIH---GGSYH-PNVRTILLGGGPASKTVLEICKQRDIP--LVQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKI-------------ADDGEILLKGP-SITPGYLHNKKATEASFVDGWFKTGDIGYLDEEGFLFVVERRSDLIISGGENIYPTEIEHVIGEYVAVKEVAVIGQPDDKWGSVPVAFIVAE--ETFDEDELQLICQTN-LASYKIPKQIIIVEKLPKTASGKIQRNKLKERHSK |
| 2QVY Chain:X ((4-503)) | --VNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVQVADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREP--------AQPAFIFYTS--TGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEE-FRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQH-LPGEKVNGYGTTEAMNSLYMRQPK-----TGTEMAPGFFSEVRIVRIGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQVS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -257022 for 3755 contacts (-68.4/contact) +
2D Compatibility (PS) -48905 + (NN) -18180 + (LL) 1140
1D Compatibility (HY) -26400 + (ID) 7350
Total energy: -356717.0 ( -95.00 by residue)
QMean score : 0.498
|
|
|