Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LETWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAENFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGAMLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE |
1LBJ Chain:A ((1-22)) | --------------------------------------------------------------------------------FVPIFTYGELQRMQEKERNKGQ--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 401 for 90 contacts (4.5/contact) +
2D Compatibility (PS) -2186 + (NN) 1476 + (LL) 17048
1D Compatibility (HY) -800 + (ID) 200
Total energy: 15739.0 ( 174.88 by residue)
QMean score : -0.101
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