Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPGGGFVAGLTTAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHVDLPILGDTALHTATLFDLGVYLVVVGVTLTIIQTIGESD
1BLL Chain:E ((356-387))
------------------------------------------------------------------INAATLTG-AMDIALGSGATGVFTNSSWLWNKL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13345 for 128 contacts (-104.3/contact) +
2D Compatibility (PS) -3317 + (NN) -762 + (LL) 8424
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -11700.0 ( -91.41 by residue)
QMean score : -0.079
(partial model without unconserved sides chains):
PDB file :
Tito_1BLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BLL-query.scw
PDB file :
Tito_Scwrl_1BLL.pdb
: