Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LMKHLTLWHTNDVHSHLEHWPRIFN--FLKEKRTAAD-------KENQSALFFDIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEG----TTLAHEDLDKLYEHAVFPVVCCNFYTNKECTEQPDWVKSIVYKEIEQVKIAIIGATAP------FRDYYEEMGWGIEEPISSIKKQVAGLD--EDTDVVILLSHLG----------LPSDERIALEIP--EVDVILGGHTHHLL--------ETGKIEGNAL---------LAAAGRWGEYIGKVDIELDE------NNQILT---KTAMTF---KTEDLPAAPNEANEIQ------GFFDKGRAELSEKVVAIPGKLAHNW----FDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTDFDIHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERAGFDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKWKLKKMYGQEEDK |
1HPU Chain:A ((9-470)) | ----ITVLHTNDHHGHF--WRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQE-----KWAKFPLLSANIY--QKSTGERLFKPWALFKR-QDLKIAVIGLTTDDTAKIGNPEYFTDIEF--RKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPD-----------SGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMAT--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170145 for 3102 contacts (-54.9/contact) +
2D Compatibility (PS) -40730 + (NN) -3529 + (LL) 5612
1D Compatibility (HY) -16400 + (ID) 5300
Total energy: -230492.0 ( -74.30 by residue)
QMean score : 0.347
|
|
|