Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKSPVAIIILDGFGKRAETVGNAVAQANKPNFDRYWADFPH-GELKAAGLDVGLP-EGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEF---QENKALNNAFTHTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSSLEYLETLQKAISDLNYGA----IATVSGR-FYAMDR-DKRWERVEKAYKAIVSAEGEKFEDPIELVKASYANDKN--DEFVVPAIIT-KDGKPVATVKDNDAVIFFNFRPDRAIQLSNAFTDKEWDHFDRGADHPKNIKFVTMTLYNPSIDAEVAF--EPIEMKNVIGEVLSNEGLSQLRIAETEKYPHVTFFMNGGRNEEFPGENRILINSPKVET-YDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETMSTPEGK------------PHTAHTTVPVPVIVTKKGVTLREGGR-------LADVAPTMLDLLGVKKPAEMTGESLIQK |
| 3NVL Chain:A ((31-562)) | LPRRKLVLVVLDGVGIGPRDEYDAVHVAKTPLMDALFNDPKHFRSICAHGTAVGLPTDADMGNSEVGHNALGAGRVVLQGASLVDDALESGEIFTSEGYRYLHGAFSQPGRT---LHLIGLLSDGGVHSRDNQVYQILKHAGANGAKRIRVHALYDGRDVPDKTSFKFTDELEEVLAKLREGGCDARIASGGGRMFVTMDRYEADWSIVERGWRAQVLGEGRAFKSAREALTKFREEDANISDQYYPPFVIAGDDGRPIGTIEDGDAVLCFNFRGDRVIEMSRAFEEEEFDKFNR-VRLPK-VRYAGMMRYDGDLGIPNNFLVPPPKLTRTSEEYLIGSGCNIFALSETQKFGHVTYFWNGNRSGKLSEERETFCEIPSDRVQFNQKPLMKSKEITDAAVDAIKSGKYDMIRINYPNGDMVGHTGDLKATITSLEAVDQSLQRLKEAVDSVNGVFLITADHGNSDDMVQRDKKGKPVRDAEGNLMPLTSHTLAPVPVFIGGAGLDPRVQMRTDLPRAGLANVTATFINLMGFEAPSD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198398 for 4463 contacts (-44.5/contact) +
2D Compatibility (PS) -52683 + (NN) -17133 + (LL) 292
1D Compatibility (HY) -35600 + (ID) 9500
Total energy: -313022.0 ( -70.14 by residue)
QMean score : 0.585
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