Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLKS----------------GGYITEKQEKAYLDYYKDSSNGSQKISS
1T92 Chain:A ((3-80))
-----------------------------------------NKEKADRQKVVSDLVALEGALDMYKLDNSRYPTTEQGLQALVSAPSAEPHARNYPEGGYIRRLPQDPWGSDYQLLSPGQHGQVD
General information:
TITO was launched using:
RESULT:
Template:
1T92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12582 for 340 contacts (37.0/contact) +
2D Compatibility (PS) -6463 + (NN) -122 + (LL) 4736
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 8483.0 ( 24.95 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_1T92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T92-query.scw
PDB file :
Tito_Scwrl_1T92.pdb
: