Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVIIVRKKIRAYILLESLVGLAILVTITSLVISEINRQQSHIARRQHEQEVLILARMAVQTDQKILEANGVNIRIEESKNKIVLFEGNKEILHVSKVKG |
3GP2 Chain:B ((8-15)) | -----RRKLKGAILTTMLATANH---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121 for 22 contacts (-5.5/contact) +
2D Compatibility (PS) -677 + (NN) 1054 + (LL) 8624
1D Compatibility (HY) 400 + (ID) 50
Total energy: 9230.0 ( 419.55 by residue)
QMean score : 0.376
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