Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIKGLLSPNSKVSPKDYKVYMRVLSFVFSVCSLIMIVSSFLHTFESNFTKGFSFGSGIALFAGSFYFLVITFSEKRFQ--HYYTKVFDERNQFIANMSCRLLFLLSVLVLVVLCLINVWFGITFSYAKFLLLILSFVLYGYLLIYFILQKLL |
1LRW Chain:B ((32-54)) | ------------------------------------------------------------------------HDPAELSKQGESLAVMDARNEWRVWNMKKTGKFEYDVKKIDGYDETKAPPAE----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 482 for 70 contacts (6.9/contact) +
2D Compatibility (PS) -1956 + (NN) 965 + (LL) 8772
1D Compatibility (HY) 0 + (ID) 200
Total energy: 8063.0 ( 115.19 by residue)
QMean score : 0.379
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