Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL |
| 1V54 Chain:L ((15-47)) | ------------------------------------------------------------------VENKWRLLAMMTLFFGSGFAAPFFIVRHQLLKK----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4351 for 129 contacts (-33.7/contact) +
2D Compatibility (PS) -3193 + (NN) 928 + (LL) 18876
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 10810.0 ( 83.80 by residue)
QMean score : -0.098
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