Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHITTVVIWKILRCLSLVFGVSILTFILLKQSPVDPVMASVNYDTSLTPVQYKAIAHHYGLDKPAPVQYFIWLKNFIQGHLGTSLVYRQPVIDIIRSRAGASFILMGLSWVLSGLIGFILGTLSAFHQGKLLDRIVRWFSYLQISVPTFWIGLIFLLIFSVQLGWFPIGISSPIGTLSQDITLADRIKHLILPVFTLSILGIANVTLHTRTKMMSVLSSEYVLFARARGETEWQIFKNHCLRNAIVPAITLHFSYFGELFGGSVLAEQVF-SYPGLGSTLTEAGLKSDTPLLLAIVMIGTLFVFAGNLIADILNSIINPQLRRKV |
3D31 Chain:C ((79-283)) | ----------------------------------------------------------------------------------------------SVISSIFLSLYAGFLATLLALLLGAPTGYILARFD-FPGKRLVESIIDVPVVVPHTVAGIALLTVFGS-RGLIGEPL-E---------SYIQFRDALPGIVVAMLFVSMPYLANSARE-GFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFISYGLSASRPIAVLLILVTLSIFLVIR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175450 for 1603 contacts (-109.5/contact) +
2D Compatibility (PS) -20807 + (NN) -3147 + (LL) 9280
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -195124.0 ( -121.72 by residue)
QMean score : 0.299
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