Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRRRTIVLWQLGIAISLILSILALNLYFHSTPLQTNAALRNLAPSLNHLFGTDGLGRDMFV------RTIKGLYFSLQVGLLGALMGVILATVFGVLAGLGNSIIDKIIAWLVDLFIGMPHLIFMILISFVVGK-------------------------GAQGVIIATAVTHWPSLARLIRNEVYHLKNKEFVQLSKSMGKTPYYIVRHHILPLIASQIFIGFILLFPHVILHEASMTFLGFGLSA---------EQPSVGIILSEAAKHI-SLGNWWLVIFPGLYLILVVNAFDTIGESLKKLFYPQTDHF |
| 3RLF Chain:F ((251-503)) | -------------------------------------------LSPGYTVTTGWKNFT-RVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAI-PDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159118 for 1440 contacts (-110.5/contact) +
2D Compatibility (PS) -21643 + (NN) -3545 + (LL) 5652
1D Compatibility (HY) -16800 + (ID) 1550
Total energy: -197004.0 ( -136.81 by residue)
QMean score : 0.217
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