Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCSTKEMRLVYRDFLLQANQENKQITVLEADLSSSMSTNVLASEFGKRYINLGIMEAEMVGLAAGLAIKG--YKPYLHTFGPFASRRVFDQVFLSLGYSQLSA------TIIGSDAGVSAEMNGGTHMPFEELGLLRLIPKATIFEVSDDIQFEAILKQTLSIDGLKYIRTIRKAPTAVYEGC--EDFSKG--FIQLRQGKDIALVASGIMVSRAIEAADYLKELGIEASVIDL-----FKIKPLPEELKPLLIDQSIVTIENHNRIGGIGSALCEWLSMEKDTTVSRMGIDERFGQVGQMKYLLEEYGLAVKDIVEHCKSIYKS |
| 1TRK Chain:A ((404-661)) | ------------------------------------------SGNYSGRYIRYGIREHAMGAIMNGISAFGANYKPYGGTFLNFVS--------YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTHQPIETLAHFRSLPNIQVWRPADGNEVSAAYKNSLESKHTPSIIALSRQNLPQLEGSSIESASKGGYVLQDVANPDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVE-------VLATTC-WGKYAHQS----FGID-RFGASGKAPEVFKFFGFTPEGVAERAQKTIAF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130810 for 1952 contacts (-67.0/contact) +
2D Compatibility (PS) -26211 + (NN) -7203 + (LL) 5012
1D Compatibility (HY) -10000 + (ID) 3750
Total energy: -172962.0 ( -88.61 by residue)
QMean score : 0.463
|
|
|