Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYVTTQILSILGILAGACLSYLKFAQGNSLLGIIWAAFALMYIVRLYKAYQKQKKEKP
2GWW Chain:B ((9-21))
---------------------------------------------NNIYKAAKDVTTSLS
General information:
TITO was launched using:
RESULT:
Template:
2GWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1374 for 42 contacts (32.7/contact) +
2D Compatibility (PS) -1421 + (NN) -803 + (LL) 4400
1D Compatibility (HY) 0 + (ID) 150
Total energy: 3400.0 ( 80.95 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2GWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GWW-query.scw
PDB file :
Tito_Scwrl_2GWW.pdb
: