Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDKQFKEESSDLVYGLHAVTESLRANTGNKLYLQDDLRGKNVDKVKALATEKKVSISWTPKKILSDMTNGGVHQGFVLKVSEFAYADLSEIMTKAENEENPLILILDGLTDPHNLGSILRTADATNVTGIIIPKHRSVGVTPV-VSKTSTGAVEHVPIARVTNLSQTLDTLKDKDFWIFGTDMNGTPSHK--WNTKGKLALVIGNEGKGISHNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRL |
| 3NK6 Chain:A ((118-259)) | -------------------------------------------------------------------------------------------------------VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVDSDLATIADRRLLRASRGYVFSLPVV-LADREEAVSFLRDNDIALMVLDTDGDLGVKDLGDRADRMALVFGSEKGGPSGLFQEASAGTVSIPMLSSTESLNVSVSVGIALHERSARNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99463 for 1080 contacts (-92.1/contact) +
2D Compatibility (PS) -14960 + (NN) -5157 + (LL) 6824
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -123056.0 ( -113.94 by residue)
QMean score : 0.567
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