Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY |
3D7A Chain:A ((86-104)) | ----------------IIIKVHKQVAYVGKVNFNEDSPLGPITITIRTKEPQKLMKWLAPRTKDGVPIE------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 178 for 71 contacts (2.5/contact) +
2D Compatibility (PS) -2051 + (NN) 585 + (LL) 3668
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 180.0 ( 2.54 by residue)
QMean score : -0.354
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