Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQKDGKFKGYDVDVVKAVFKG-SKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAV---VGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYV-SGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQSLNLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 4GVO Chain:A ((27-238)) | --------------------------------------------ENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFND-VAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNN--FEIAYEGQGSNDTANQLK---TGRADATISTPFAVDFQNKTSAIKEKVV---GDVLSN--AKVYFMLGKDE--TKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47053 for 1471 contacts (-32.0/contact) +
2D Compatibility (PS) -22464 + (NN) -7591 + (LL) 4544
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -88664.0 ( -60.27 by residue)
QMean score : 0.445
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