Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNKASLRVTDLSQKQTIKETLNVRDSHIAETALVADSGNFASTSFFQDGLITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYL-TTGAVTALDLYDHKLELVMENAKRLGLSDKIKTKKLDASKAHEYFLEDT--FDKILVDAPCSGIGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPNFEQVELS-------HTQEDIVKRGCISISPEQYHTDGFFIGQVKRIL |
| 3AJD Chain:A ((55-274)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA-DMRKYKDYLLKNEIFFDKILLDAPCS----------------EEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIKANEFKGINIKEGYIK-GTLRVFP---PNEPFFIAKLRKI- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80956 for 1602 contacts (-50.5/contact) +
2D Compatibility (PS) -21171 + (NN) -6561 + (LL) 19776
1D Compatibility (HY) -14800 + (ID) 3150
Total energy: -106862.0 ( -66.71 by residue)
QMean score : 0.462
|
|
|