Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLENIISLVSQYQKIDVNTLSELLQVSKVTIRKDLDKLEGKGLLHREHGYAVLNSGDDLNVRLSFNHKTKKEIAALAANMVSDNDTILIESGSTCALLAENICQTKRNVTILTNSCFIANYLREYDSCQIVLLGGEYQSSSQVTVGPLLKKMISLFHVSLAFVGTDGFDPKLGFMGRDLMRSEV-AQEMANAADEVIILTDSSKFNQTALVEQLPLSTVSQVITDKHPNSEIANLFQEAEITIQSLLQVP |
3IXQ Chain:A ((3-130)) | -------------------------------------------------------------------NEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGN-R--I--------------REEELTVFGIPTSFEAKMLAMQYEIPLVTLDEYDVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSEMGGEAVIRLGDRKRGPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65424 for 1011 contacts (-64.7/contact) +
2D Compatibility (PS) -14000 + (NN) -7994 + (LL) 6072
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -87346.0 ( -86.40 by residue)
QMean score : 0.383
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