Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLERQKLLAKVAYLYYMEGKSQSEIANELGIYRTTISRMLAKAREEGLVRIEISDFNPEIFQLESYFKSKYHLKDIEIVSSRKDSDTSEIEKDLAHVAAAMIRKKIKENDKVGIAWGRTLSKVVEAMRPHPVSQ-VSFVPLAGG-PSHINARYHVNTLVYEMSRRFQGSCTFINATLVQENANLAKGILTSKYFEGLMDNWEKLDVAIVGVGGKPKSNEQQWLDLLNQDDFQCLDEEAAVGEITCRFFNHSGDPV-NQHLAKRTIGITLEQLQKVPNRIAVAHGNYKAAALLAVLKKGYINHLVTDFSTALNILRLDKDTFVDTIYQKS |
| 4L4Y Chain:A ((18-265)) | ----------------------------------------------------------EGCLEYETQLRRQFSLQHVRVIPGLA--D---VGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAAC---------SVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVS--------GYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185196 for 2037 contacts (-90.9/contact) +
2D Compatibility (PS) -25240 + (NN) -12868 + (LL) 7740
1D Compatibility (HY) -18800 + (ID) 3400
Total energy: -237764.0 ( -116.72 by residue)
QMean score : 0.459
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