Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFL-EAVTCKIYVDPKEFEHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
| 1DAR Chain:A ((587-684)) | ------------------------------------------------------------------------------------------------------------------SMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37060 for 650 contacts (-57.0/contact) +
2D Compatibility (PS) -10307 + (NN) -1236 + (LL) 7032
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -43471.0 ( -66.88 by residue)
QMean score : 0.397
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