Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFENIIYGIDGNVATIMLNRPDISNGFNIPMCQEIIDAIRLVSENKDVMFLVIEAQGPIFSIGGDLKVMKAAVESDDISSLTKIAELVNQIS-YD-LLQLEKPVVMCVDGAVAGAAANIALAADFVIASKKSKFIQAFVGVGLAPDAGGLLLLSKSIGITRAVQLALTGESLSAEKAEALGIVYKLCESDKIGKIKDQLLKRLSRHSINSYQAIKSLAWEAAFKDWEQYKKLELQLQESLAFKQDFKEGVRAHADRRRPNFLGK
3MOY Chain:A ((19-260))
------------GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEM--------VTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFTDR
General information:
TITO was launched using:
RESULT:
Template:
3MOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154311 for 1906 contacts (-81.0/contact) +
2D Compatibility (PS) -26483 + (NN) -8769 + (LL) 1180
1D Compatibility (HY) -5600 + (ID) 3500
Total energy: -197483.0 ( -103.61 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3MOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOY-query.scw
PDB file :
Tito_Scwrl_3MOY.pdb
: