Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIMEKYTSIKQSG----RHYGLDLLRIISMFMIVITHV--LGKGGLRSSVEGHADSYFIVTWI--IQVLVYGAVNCYALISGYVGINS--------RYRYSKLLS-IWAQVFFYTFTITALFAITGHEV---TLLNWRDAFFPIVSGQYWYITA-YFGLLVFMPVINNG-LNALTDKQLKQLVLLMFIIFSILPAVLNNRVPEFSLSKGFEMTWLLILYIIGAYLKRIDLNIFKTSYLLIIYLLSLVATYAMKFSVGDIWYWYVSPTLTLGAVSLF-ILFARASIKPSGFLKKIIVVLAPSTLGVYLCHLHPLIVKYFVRDFAE----TFVYESIYLYPFLILGAGILIYLLAF-IVERIRLRIFKAIHFSNF-L----------------RWFDDKFPY------ |
| 4OL8 Chain:A ((24-461)) | PVWLQQKYREIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLH-----SGYHQIPMEPKDRYKTAFVTPSGKYEY-TVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFS--ESPEEHWKHLDTVLERLKNENLIV--------KKKKCKFEETEFLG--YSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLHGKHFTLRTNHARRVQRWLDDLATYDFTLEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274770 for 2314 contacts (-118.7/contact) +
2D Compatibility (PS) -34333 + (NN) 9418 + (LL) 2708
1D Compatibility (HY) -1600 + (ID) 3350
Total energy: -301927.0 ( -130.48 by residue)
QMean score : 0.087
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