Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVKLFAIHLFFIVISFGIKYYHLQGPNLIWNMTLALIALDFAYLTSLFKKKILIGLFALAWFFFYPNTFYMLTDIIHMHFVGDVLYNKTNLILYILYVSSILFGFLSGIESFSVIMRKFRISNIFLRWGIIGIVSFVSSFGIHIGRYARLNSWDILTKPQVVINELLAVPSRDSFHFILGFTFLQVLCLIFMDYSAGKKLEK |
2KET Chain:A ((1-7)) | -------------------------------------------------------------------------------------------------------------------------------------------------GRFKRFRKKFKKLFKKLSPVIPLLHL-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26 for 18 contacts (1.4/contact) +
2D Compatibility (PS) -715 + (NN) 340 + (LL) 16320
1D Compatibility (HY) -800 + (ID) 150
Total energy: 15021.0 ( 834.50 by residue)
QMean score : -0.371
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