Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI |
2Z1M Chain:A ((3-10)) | --GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 0 for 14 contacts (0.0/contact) +
2D Compatibility (PS) -937 + (NN) 220 + (LL) 132
1D Compatibility (HY) -400 + (ID) 250
Total energy: -1235.0 ( -88.21 by residue)
QMean score : 0.496
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