Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYVIFSFEEGDYLCDNKD------KLLIFESRGLAYQYMQKHYLKPIPLQKTKRIMYPMSYYQAPFKVQQVC
2G2N Chain:A ((65-103))
------VFKTGDYFKKQNLESFFPEIPVEFHINKV-----NEHYHVPLLLSQYGYSTYRGS------------
General information:
TITO was launched using:
RESULT:
Template:
2G2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1459 for 109 contacts (13.4/contact) +
2D Compatibility (PS) -3452 + (NN) 908 + (LL) 2584
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -951.0 ( -8.72 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_2G2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G2N-query.scw
PDB file :
Tito_Scwrl_2G2N.pdb
: