Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKYYLVLAEVSIFQTVWLIPREDGSIGWTDEIKQAKPFLSYEEAKNKTEAHMQSVFEFIASYKIIEFTKEELDNFLIPTS
2Q3M Chain:A ((225-246))
---------------------------------------FVTYEELKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFEG
General information:
TITO was launched using:
RESULT:
Template:
2Q3M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -220 for 94 contacts (-2.3/contact) +
2D Compatibility (PS) -2352 + (NN) -624 + (LL) 3384
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -2712.0 ( -28.85 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_2Q3M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q3M-query.scw
PDB file :
Tito_Scwrl_2Q3M.pdb
: