Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKQNNRMTIYYKEENLKKYEALKSFFEADEHISSMTTSATFLFLVDICYQLFIESNSGQSYSERLKQ--FLNSKNSDVEELKNKVKLV-----SRQLDQLLYL-ELTNFHALTKGNDFDIQDLESVHSRFDPMQHELIARIDDIIKEDVARGQAMKHSH |
2OMV Chain:A ((50-123)) | --------------------------------------------------RLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNN-QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14208 for 362 contacts (39.2/contact) +
2D Compatibility (PS) -6425 + (NN) 1924 + (LL) 4508
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: 8115.0 ( 22.42 by residue)
QMean score : 0.172
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