Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEKYGVPRDIYAKVKIIGLV--IADIVFVGGSAVAALSIGTRIFPTNQWPQLVAFMILTPLMCLYLVLPTNGGKKNWHSMFLFFRRRRKRYISLNYQRRENR
3WU2 Chain:E ((11-46))
---------DIITSVRYWVIHSITIPALFIAGWLFVSTGLAYDVFGTPRPDSYYAQEQRSIPLVTDRFEAKQQVETFLEQLK---------------------
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12051 for 138 contacts (-87.3/contact) +
2D Compatibility (PS) -3295 + (NN) 1094 + (LL) 2312
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -15840.0 ( -114.78 by residue)
QMean score : -0.384
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: