Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQSDAYLSLNAKTRFRDRTGNYHFASDKEAVEQYMIEHVEPNTMAFTSLIEKLDYLVSNNYYESDLLKQYNLEFICQIFEHAYAKKFAFLNFMGALKFYNAYALKTEDNRYYL-------EHYEDRVVMNALFLAAGDEKAAYDLVDDMLANRFQPATPTFLNAGKKRRGEYISCYLLRIEDN-MESISRAISTSLQLSKRGGGVALCLTNLREFGAPIKGIKNQATGIVPVMKLLEDSFSYANQLGQRQGAGAVYLHAHHPEVLTFLDTKRENADEKIRIKSLSLGLVIPDITFELAKANKDMALFSPYDIERVYGKPMSDISITEEYETLLAN----ADIRKTFISARKLFQTIAELHFESGYPYILFEDTVNAKNPHKKEGRIVMSNLCSEIAQVNTASQFSEDLTFTKVGHDVCCNLGS--INIARAMDQAADFEKLIANSIRALDRVSRTSDLD--SAPSIKKGNAANHAVGLGAMNLHGFLATNHIYYDSQEAIDFTDCFFYAMAYYAFKASNHLAKEKGTFEGFSESSYADGSYFYQYTEQNFEPKTQRVKNLLAEYGLTLPSQEDWRKLVQSIKEIGLANAHLLAVAPTGSISYLSSCTPSLQPVVSPVEVRK--EGALGRVYVPAYKIDADNYVYYK---------------------------KGAYEVGPEAIINIAAAAQKHIDQAISLTLFMTDQATTRDLNKAYIQAFKQKCAS-IYYVRVRQDILEGSESYDDDMLDDFTSSDLEDCQACMI
3HNF Chain:A ((143-742))---------------------------------------------------------------------------------------------------YNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNR-PQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQ----PGAFAIYLEPWHLDIFEFLDLKK---------RDLFFALWIPDLFMKRVETNQDWSLMCPNEC------PGLDEVWGEEFEKLYASYEKQGRVRKV-VKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVA------------VCNLASLALNMYVTSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKG--ILQYDMWNVTPT----------------DLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGK-LTSMHFYGWKQGLKTGMYYLRTR-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -247335 for 4774 contacts (-51.8/contact) +
2D Compatibility (PS) -56940 + (NN) -16818 + (LL) 13172
1D Compatibility (HY) -37600 + (ID) 7750
Total energy: -353271.0 ( -74.00 by residue)
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_3HNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HNF-query.scw
PDB file : Tito_Scwrl_3HNF.pdb: