Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFPNIDNIIKNYIKEMITHSDIPDLQKQLETAYQVPYSFALGIYISTIESIILNWIDHDFTEEPEEIARYITSVVRI
3JB3 Chain:A ((678-720))
-----------------------------LKTASQNPYSYETYIYITPIAAA----VRFPFYSNSAMINRYMTAVADD
General information:
TITO was launched using:
RESULT:
Template:
3JB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1826 for 163 contacts (-11.2/contact) +
2D Compatibility (PS) -4533 + (NN) -2469 + (LL) 2484
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -10394.0 ( -63.77 by residue)
QMean score : -0.019
(partial model without unconserved sides chains):
PDB file :
Tito_3JB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JB3-query.scw
PDB file :
Tito_Scwrl_3JB3.pdb
: