Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDENGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADFRDQMAFIAENGSAAVLFN---RLAYEQHLSREQYLDIIDHL-SKSPYME--NNEYVLSGKDGAYIL-------SDANPD-------------YIEFITHYYDNLQKVSHFEDVDDIIFKVTANFTEETVRQAEEWVNQAIPYTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
| 1NRW Chain:A ((5-271)) | --KLIAIDLDGTLLNSKHQVSLEN-ENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANG--AVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTL-VSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67977 for 1980 contacts (-34.3/contact) +
2D Compatibility (PS) -26312 + (NN) -10131 + (LL) 1052
1D Compatibility (HY) -11600 + (ID) 3300
Total energy: -118268.0 ( -59.73 by residue)
QMean score : 0.424
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