Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGSLSEIKDKILSTEKTSKITSAMQMVSSAKLVKSEQAARDFQVYASKIRQITTNLLKSDLVSGSDNPMLASRPVKKTGYIVITSDKGLVGGYNSKILKAMMDTITDYHTENDDYAIISIG-SVGSDFFKARG--MNVSFELRGLEDQPSFDQVGKIIAQAVEMYKNELFDELYVCYNHHVNSLTSQVRMQQMLPIKELDADEASEDRVITGFELEPNREVILEQLLPQYTE----SLIYGAIIDAKTAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVAGANALE |
| 4Z1M Chain:G ((1-272)) | --ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY---------------------------------------SDRGLCGAIHSSVAKQMKS----------------VGDKIRSILHRTHSDQFLVTFKEVG-RRPPTFGDASVI---ALELLNSGY---------RFRSVISYKT------------------------------------------QEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 513 for 1127 contacts (0.5/contact) +
2D Compatibility (PS) -19273 + (NN) -3141 + (LL) 8764
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -29437.0 ( -26.12 by residue)
QMean score : 0.362
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