Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSNYSYPLDPSWNTEDITKVLRFLNQVEHAYENSVKVDDLLDSYKEFKKVVKSKAQEKQIDREFQRTSGYSTYQAVKAAQQQAKGFISLGR
1YWM Chain:A ((139-173))
----------DPKWTEESRTEVLTGLDTIKTDIDNNPKTQTDIDSKIVEVNELEKLLVLKLAAALEHHHH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1YWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -951 for 137 contacts (-6.9/contact) +
2D Compatibility (PS) -4018 + (NN) -2459 + (LL) 2708
1D Compatibility (HY) -800 + (ID) 600
Total energy: -6120.0 ( -44.67 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1YWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YWM-query.scw
PDB file :
Tito_Scwrl_1YWM.pdb
: