Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLVVDDEPVARNELIYLLNKYDSNLVIAEAHDMATALAILLRETFDVALLDIHLRDDSGLQLAEYINKMPK----PPLLIFATAYDQYAIQAFEHDARDYLLKPYDFDRLKQAMDRVKGALSTSTIIESVTSGPLFKQQYPLTVEDRIYLVSADDILLIEAMQGKLIIQTPDKNYEIDGSLQQWQDKLPSSQFVRVHRSYIVNINAIKTIEPWFNQTLQLHLCNKITVPVSRANVKPLKQMLGIST
4HNS Chain:A ((5-122))
MKILIVDDFSTMRRIVKNLLRDLGFNNT-QEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE-------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HNS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88723 for 877 contacts (-101.2/contact) +
2D Compatibility (PS) -12493 + (NN) -7946 + (LL) 9784
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -107578.0 ( -122.67 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4HNS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HNS-query.scw
PDB file :
Tito_Scwrl_4HNS.pdb
: