Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYTKKDLEENRNRYKDYMTEGL-----YNATISEENKAQNQAYRGF-VVNFEFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSEETESYGAIAPSNTKD |
4MRH Chain:A ((18-83)) | --------------------------------------------------------------------------EKNGRYSISRTEAADLCQAFNSTLPTMDQMKLALSKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYILVTSNTSHYDTYCFNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6322 for 299 contacts (21.1/contact) +
2D Compatibility (PS) -6142 + (NN) 2040 + (LL) 5740
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 5160.0 ( 17.26 by residue)
QMean score : 0.055
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