Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYLDNAATTALTPSVIEKMTNVMTSNYGNPSSIHTFGRQANQLLRECRQIIAEYLNVNSREIIFTSGGTESNNTAIKGYAL---ANQ-LKG--KHIITSEIEHHSVLHTMTYLSERFGFDITYLKPNH--GQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLR--NHQAV--------FHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYC------APHHFDSLLHGGDQEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQLRTTFLDAISDLDF-----YLNN---GQDCLPHVLN--IGFPRQNNGLLLTQLDLAGFAVSTGSACTAG-TVEPSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD |
| 3GZC Chain:A ((27-433)) | -VYMDYNATTPLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQT--GAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIRGLGEFTPLY--PMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVR-DYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRV--LMASVGAACHSDHGDQPSPVLLS-YGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165812 for 3135 contacts (-52.9/contact) +
2D Compatibility (PS) -38606 + (NN) -11071 + (LL) 532
1D Compatibility (HY) -18800 + (ID) 6750
Total energy: -240507.0 ( -76.72 by residue)
QMean score : 0.455
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